7KIU
Structure of recombinant human DNase1L3 in complex with Mg2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-15 |
Detector | RAYONIX MX325HE |
Wavelength(s) | 1.12709 |
Spacegroup name | P 1 |
Unit cell lengths | 52.313, 72.671, 73.169 |
Unit cell angles | 85.39, 80.56, 88.39 |
Refinement procedure
Resolution | 32.060 - 2.220 |
R-factor | 0.1925 |
Rwork | 0.191 |
R-free | 0.23040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dnk |
RMSD bond length | 0.015 |
RMSD bond angle | 1.738 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.070 | 2.250 |
High resolution limit [Å] | 2.210 | 2.210 |
Rmerge | 0.145 | 1.391 |
Rmeas | 0.153 | 1.609 |
Number of reflections | 50424 | 2368 |
<I/σ(I)> | 8.5 | 0.9 |
Completeness [%] | 94.9 | 90.3 |
Redundancy | 9.1 | 3.9 |
CC(1/2) | 0.998 | 0.491 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 283 | 19% PEG 8000, 250 mM Magnesium Chloride, 100 mM Tris pH 8.5 |