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7KDZ

Crystal structure of the bromodomain (BD) of human Bromodomain and PHD finger-containing Transcription Factor (BPTF) bound to TP-238

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-01-31
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 43 21 2
Unit cell lengths42.670, 42.670, 126.820
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.710 - 1.540
R-factor0.1865
Rwork0.185
R-free0.20510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3uv2
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]31.71031.7101.580
High resolution limit [Å]1.5406.8901.540
Rmerge0.0740.0410.925
Rmeas0.0770.0430.961
Total number of observations255441
Number of reflections181582611314
<I/σ(I)>18.4541.883.13
Completeness [%]99.899.699.9
Redundancy14.06811.45613.846
CC(1/2)0.9990.9990.883
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2900.2M Lithium sulfate monohydrate, 0.1M BIS-TRIS pH6.5, 25 percent polyethylene glycol 3,350

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