7DW5
Crystal structure of DUX4 HD1-HD2 domain complexed with ERG sites
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-09-20 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.9789 |
Spacegroup name | P 1 |
Unit cell lengths | 42.974, 64.451, 69.432 |
Unit cell angles | 95.82, 92.55, 103.31 |
Refinement procedure
Resolution | 41.700 - 2.830 |
R-factor | 0.2237 |
Rwork | 0.223 |
R-free | 0.24160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6a8r |
RMSD bond length | 0.005 |
RMSD bond angle | 0.878 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.700 | 2.850 |
High resolution limit [Å] | 2.830 | 2.830 |
Rmerge | 0.180 | 0.180 |
Number of reflections | 12265 | 453 |
<I/σ(I)> | 3.9 | 0.4 |
Completeness [%] | 92.0 | 85 |
Redundancy | 2.9 | 2.6 |
CC(1/2) | 0.990 | 0.644 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG3350 |