7CCZ
Crystal structure of the ES2 intermediate form of human hydroxymethylbilane synthase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-10 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 81.454, 79.542, 108.678 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.870 - 1.790 |
R-factor | 0.2004 |
Rwork | 0.198 |
R-free | 0.24280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ecr |
RMSD bond length | 0.010 |
RMSD bond angle | 1.217 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.200 | 1.900 |
High resolution limit [Å] | 1.790 | 1.790 |
Number of reflections | 66546 | 20529 |
<I/σ(I)> | 9.33 | 1.3 |
Completeness [%] | 99.8 | 99.2 |
Redundancy | 3.4 | 3.4 |
CC(1/2) | 0.998 | 0.688 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.3 | 293 | PEG 3350, diammonium hydrogen citrate, dithiothreitol |