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7APO

Crystal structure of RARalpha ligand binding domain in complex with a fragment of the TIF2 coactivator

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X6A
Synchrotron siteNSLS
BeamlineX6A
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0000
Spacegroup nameP 1 21 1
Unit cell lengths53.694, 47.573, 120.999
Unit cell angles90.00, 96.17, 90.00
Refinement procedure
Resolution46.960 - 2.400
R-factor0.1877
Rwork0.185
R-free0.24070
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3kmr
RMSD bond length0.009
RMSD bond angle0.854
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.9602.486
High resolution limit [Å]2.4002.400
Rmerge0.0580.251
Number of reflections227072250
<I/σ(I)>9.35
Completeness [%]93.8
Redundancy2.4
CC(1/2)0.9970.923
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2M Lithium Chloride, 0.1M MES pH6.0, 20% PEG6000

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PDB entries from 2026-01-14

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