7A79
Crystal structure of RXR gamma LBD in complexes with palmitic acid and GRIP-1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-16 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 63.246, 67.051, 110.700 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.010 - 2.050 |
R-factor | 0.1979 |
Rwork | 0.195 |
R-free | 0.24830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6sjm |
RMSD bond length | 0.014 |
RMSD bond angle | 1.351 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.010 | 46.010 | 2.120 |
High resolution limit [Å] | 2.050 | 7.940 | 2.050 |
Rmerge | 0.148 | 0.097 | 0.782 |
Rmeas | 0.163 | 0.103 | 0.880 |
Rpim | 0.054 | 0.033 | 0.310 |
Number of reflections | 30235 | 603 | 2910 |
<I/σ(I)> | 8.2 | 2 | |
Completeness [%] | 99.9 | 99.5 | 100 |
Redundancy | 8.5 | 8.2 | 7.9 |
CC(1/2) | 0.994 | 0.993 | 0.754 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 17% PEG 3350, 0.1M potassium citrate |