7L73
Crystal structure of the first bromodomain (BD1) of human BRDT bound to ERK5-IN-1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-04-21 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.9700 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 84.370, 23.570, 58.450 |
| Unit cell angles | 90.00, 104.66, 90.00 |
Refinement procedure
| Resolution | 40.812 - 1.460 |
| R-factor | 0.1706 |
| Rwork | 0.170 |
| R-free | 0.19030 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5vbq |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.070 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1-2575_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 40.812 | 40.812 | 1.500 |
| High resolution limit [Å] | 1.460 | 6.530 | 1.460 |
| Rmerge | 0.044 | 0.020 | 0.407 |
| Rmeas | 0.052 | 0.024 | 0.486 |
| Total number of observations | 68881 | ||
| Number of reflections | 19695 | 248 | 1429 |
| <I/σ(I)> | 17.67 | 42.67 | 3.1 |
| Completeness [%] | 99.4 | 96.1 | 99.9 |
| Redundancy | 3.497 | 3.149 | 3.339 |
| CC(1/2) | 0.999 | 0.999 | 0.846 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.05 M (NH4)2SO4, 0.05 M Bis-tris (pH 6.5), and 30 % Pentaerythritol ethoxylate |






