6YG1
Crystal structure of MKK7 (MAP2K7) in an active state, allosterically triggered by the N-terminal helix
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-09 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 127.160, 67.870, 142.780 |
Unit cell angles | 90.00, 114.76, 90.00 |
Refinement procedure
Resolution | 64.830 - 2.220 |
R-factor | 0.2051 |
Rwork | 0.204 |
R-free | 0.23170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dyl |
RMSD bond length | 0.013 |
RMSD bond angle | 1.407 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 64.830 | 58.511 | 2.340 |
High resolution limit [Å] | 2.220 | 7.020 | 2.220 |
Rmerge | 0.090 | 0.050 | 0.661 |
Rmeas | 0.105 | 0.059 | 0.779 |
Rpim | 0.053 | 0.030 | 0.406 |
Number of reflections | 54756 | 1812 | 7970 |
<I/σ(I)> | 8.2 | 10.7 | 1.1 |
Completeness [%] | 99.8 | 99.4 | 99.8 |
Redundancy | 3.7 | 3.5 | 3.5 |
CC(1/2) | 0.996 | 0.675 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277.15 | 27% PEG3350, 0.2 M potassium thiocyanate, 10% ethylene glycol, 0.1 M bis-tris propane, pH 7.5 |