6Y23
DDR1 kinase autoinhibited by its juxtamembrane region
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 105.307, 105.307, 406.939 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 54.420 - 2.580 |
R-factor | 0.2275 |
Rwork | 0.225 |
R-free | 0.27010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bvw |
RMSD bond length | 0.003 |
RMSD bond angle | 0.537 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18rc1_3769) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.130 | 2.620 |
High resolution limit [Å] | 2.580 | 2.580 |
Rpim | 0.128 | 1.129 |
Number of reflections | 43468 | 2087 |
<I/σ(I)> | 6.5 | 1.2 |
Completeness [%] | 100.0 | 99.1 |
Redundancy | 20.3 | 20.9 |
CC(1/2) | 0.979 | 0.443 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 9.5 mg/ml protein in 20 mM HEPES pH 7.5, 200 mM NaCl, 1 mM TCEP. Precipitant: 100 mM Tris pH 8.0, 1.5 M ammonium sulphate. |