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6QGN

Crystal structure of APT1 bound to 2-Bromopalmitate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-11
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.91971
Spacegroup nameP 21 21 21
Unit cell lengths58.900, 109.616, 174.713
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.427 - 2.099
R-factor0.2322
Rwork0.230
R-free0.27330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5sym
RMSD bond length0.007
RMSD bond angle0.830
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.4272.210
High resolution limit [Å]2.0902.090
Rmerge0.1000.500
Number of reflections669029483
<I/σ(I)>12.83.2
Completeness [%]99.598.3
Redundancy7.77
CC(1/2)0.9900.710
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291D1 Morpheus (Molecular Dimensions) 0.1 M imidazole, 0.1 M MES monohydrate, 20% v/v PEG 500 MME, 10% w/v PEG 2000, 20 mM 1,6-Hexanediol, 20 mM 1-Butanol, 20 mM 1,2-Propanediol, 20 mM 2- Propanol, 20 mM 1,4-Butanediol, 20 mM 1,3-Propanediol, pH 6.5.

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PDB entries from 2024-07-17

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