6QGN
Crystal structure of APT1 bound to 2-Bromopalmitate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-11 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.91971 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.900, 109.616, 174.713 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.427 - 2.099 |
R-factor | 0.2322 |
Rwork | 0.230 |
R-free | 0.27330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5sym |
RMSD bond length | 0.007 |
RMSD bond angle | 0.830 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.427 | 2.210 |
High resolution limit [Å] | 2.090 | 2.090 |
Rmerge | 0.100 | 0.500 |
Number of reflections | 66902 | 9483 |
<I/σ(I)> | 12.8 | 3.2 |
Completeness [%] | 99.5 | 98.3 |
Redundancy | 7.7 | 7 |
CC(1/2) | 0.990 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | D1 Morpheus (Molecular Dimensions) 0.1 M imidazole, 0.1 M MES monohydrate, 20% v/v PEG 500 MME, 10% w/v PEG 2000, 20 mM 1,6-Hexanediol, 20 mM 1-Butanol, 20 mM 1,2-Propanediol, 20 mM 2- Propanol, 20 mM 1,4-Butanediol, 20 mM 1,3-Propanediol, pH 6.5. |