Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6ODL

Crystal structure of GluN2A agonist binding domain with 4-butyl-(S)-CCG-IV

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2015-06-11
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.987
Spacegroup nameP 41
Unit cell lengths52.094, 52.094, 197.804
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.026 - 2.300
R-factor0.2294
Rwork0.224
R-free0.28270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2a5s
RMSD bond length0.003
RMSD bond angle0.760
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.310
High resolution limit [Å]2.2702.270
Rmeas0.1250.482
Rpim0.0520.233
Number of reflections226382296
<I/σ(I)>122.75
Completeness [%]94.298.2
Redundancy4.93.9
CC(1/2)0.9970.596
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.2 M AMMONIUM SULFATE AND 16-22% PEG 4000

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon