6NN4
The structure of human liver pyruvate kinase, hLPYK-D499N, in complex with Fru-1,6-BP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-01-28 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 120.572, 204.662, 112.334 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.437 - 2.150 |
R-factor | 0.2307 |
Rwork | 0.230 |
R-free | 0.25340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ip7 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.142 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.440 | 2.190 |
High resolution limit [Å] | 2.150 | 2.150 |
Number of reflections | 149968 | |
<I/σ(I)> | 10.4 | |
Completeness [%] | 99.0 | |
Redundancy | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.2 M ammonium citrate dibasic, 20% PEG3350 |