6MS7
Peroxisome proliferator-activated receptor gamma ligand binding domain in complex with a novel selective PPAR-gamma modulator VSP-77
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-20 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0782 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.620, 53.890, 66.720 |
Unit cell angles | 90.00, 107.24, 90.00 |
Refinement procedure
Resolution | 32.556 - 1.430 |
R-factor | 0.1872 |
Rwork | 0.186 |
R-free | 0.20800 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.140 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.900 | 1.490 |
High resolution limit [Å] | 1.410 | 1.410 |
Rmerge | 0.058 | |
Rmeas | 0.069 | |
Rpim | 0.036 | |
Number of reflections | 56329 | |
<I/σ(I)> | 13.4 | |
Completeness [%] | 98.7 | |
Redundancy | 3.5 | |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 300 | 0.1 M of tri-sodium citrate (pH 5.5), 20% w/v PEG 3350 |