6M0X
Crystal structure of Streptococcus thermophilus Cas9 in complex with AGGA PAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 200 |
Detector technology | PIXEL |
Collection date | 2019-02-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 322.165, 75.250, 70.008 |
Unit cell angles | 90.00, 93.28, 90.00 |
Refinement procedure
Resolution | 48.896 - 2.561 |
R-factor | 0.2272 |
Rwork | 0.226 |
R-free | 0.25560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5axw |
RMSD bond length | 0.008 |
RMSD bond angle | 0.901 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.650 |
High resolution limit [Å] | 2.560 | 5.510 | 2.560 |
Rmerge | 0.103 | 0.049 | 0.720 |
Rmeas | 0.112 | 0.053 | 0.786 |
Rpim | 0.043 | 0.021 | 0.310 |
Total number of observations | 360588 | ||
Number of reflections | 54046 | 5554 | 5342 |
<I/σ(I)> | 5.3 | ||
Completeness [%] | 99.9 | 99.8 | 99.7 |
Redundancy | 6.7 | 6.5 | 6.3 |
CC(1/2) | 0.998 | 0.863 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 290 | KCL, BaCL2, MPD, MgCL2 |