6LUR
Human PUF60 UHM domain (thioredoxin fusion) in complex with a small molecule binder
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.019, 90.590, 288.928 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.000 |
R-factor | 0.2033 |
Rwork | 0.201 |
R-free | 0.25260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dxb |
RMSD bond length | 0.007 |
RMSD bond angle | 1.420 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 2.020 |
High resolution limit [Å] | 1.900 | 5.670 | 1.900 |
Rmerge | 0.094 | 0.038 | 0.836 |
Rmeas | 0.116 | 0.046 | 1.105 |
Total number of observations | 774605 | ||
Number of reflections | 136075 | 11401 | 34559 |
<I/σ(I)> | 6.95 | 21.39 | 0.71 |
Completeness [%] | 93.2 | 98.7 | 69.5 |
Redundancy | 2.708 | 3.147 | 1.48 |
CC(1/2) | 0.994 | 0.997 | 0.468 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.3-1.6M AmSO4, 0.2M potassium formate |