6LKM
Crystal structure of Ribonucleotide reductase R1 subunit, RRM1 in complex with 5-chloro-N-((1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)-4-methyl-3,4-dihydro-2H-benzo[b][1,4]oxazine-8-sulfonamide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-1A |
| Synchrotron site | Photon Factory |
| Beamline | BL-1A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-11-25 |
| Detector | DECTRIS PILATUS 2M-F |
| Wavelength(s) | 0.9970 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 227.830, 66.920, 110.000 |
| Unit cell angles | 90.00, 103.82, 90.00 |
Refinement procedure
| Resolution | 110.617 - 2.550 |
| R-factor | 0.2135 |
| Rwork | 0.210 |
| R-free | 0.27710 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2wgh |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.668 |
| Data scaling software | SCALA (3.3.22) |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 110.617 | 64.054 | 2.690 |
| High resolution limit [Å] | 2.550 | 8.060 | 2.550 |
| Rmerge | 0.030 | 0.328 | |
| Rmeas | 0.086 | 0.035 | 0.406 |
| Rpim | 0.048 | 0.019 | 0.235 |
| Total number of observations | 5999 | 20655 | |
| Number of reflections | 52639 | 1773 | 7566 |
| <I/σ(I)> | 10.1 | 20.2 | 3.2 |
| Completeness [%] | 99.5 | 99.9 | 98.6 |
| Redundancy | 3.1 | 3.4 | 2.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 300 | Sodium acetate buffer, PEG3350, Lithium sulfate |






