6H2V
Crystal structure of human METTL5-TRMT112 complex, the 18S rRNA m6A1832 methyltransferase at 2.5A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-25 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97996 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.380, 105.894, 169.239 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.770 - 2.490 |
R-factor | 0.215 |
Rwork | 0.213 |
R-free | 0.24900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6h2u |
RMSD bond length | 0.010 |
RMSD bond angle | 1.220 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.650 |
High resolution limit [Å] | 2.490 | 2.490 |
Rmerge | 0.144 | |
Number of reflections | 36060 | |
<I/σ(I)> | 14.05 | |
Completeness [%] | 99.8 | 99 |
Redundancy | 13.5 | |
CC(1/2) | 0.999 | 0.747 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 277 | 25% PEG 4,000; 0.2 M ammonium sulfate; 100 mM Na citrate pH 5.6 |