6G0S
Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated SIRT7 peptide (K272ac/K275ac)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-28 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.393, 59.376, 106.017 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.800 - 1.480 |
R-factor | 0.1786 |
Rwork | 0.177 |
R-free | 0.20950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Ensemble of 2OSS 2ouo 2grc 2oo1 3dai 3d7c 3dwy |
RMSD bond length | 0.015 |
RMSD bond angle | 1.654 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 51.805 | 51.805 | 1.550 |
High resolution limit [Å] | 1.475 | 4.660 | 1.480 |
Rmerge | 0.035 | 0.955 | |
Rmeas | 0.084 | 0.038 | 1.031 |
Rpim | 0.031 | 0.015 | 0.385 |
Total number of observations | 328804 | ||
Number of reflections | 45984 | 1621 | 6634 |
<I/σ(I)> | 14.5 | 14.3 | 0.8 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 7.2 | 6.5 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 20.0 % PEG3350 10.0 % EtGly 0.1 M bis-tris-propane pH 8.5 0.2M NaOOCCH3 |