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6F0W

prolyl hydroxylase in complex with hypoxia inducible factor oxygen degradation domain peptide fragment from Trichoplax adhaerens

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyCCD
Collection date2010-09-25
DetectorADSC QUANTUM 315
Wavelength(s)0.9795
Spacegroup nameP 1
Unit cell lengths40.841, 41.321, 42.076
Unit cell angles114.06, 95.67, 103.69
Refinement procedure
Resolution37.478 - 1.301
R-factor0.1389
Rwork0.138
R-free0.16220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3hqr
RMSD bond length0.012
RMSD bond angle1.157
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.350
High resolution limit [Å]1.3002.8001.300
Rmerge0.1120.065
Total number of observations377792
Number of reflections5542857235382
<I/σ(I)>8.5
Completeness [%]95.198.492.3
Redundancy6.86.84.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529320 mg/ml protein, 1mM MN(II)CL2, 2mM N-oxalylglycine, 10mM taHIF-ODD peptide, 0.31M ammonium acetate, 24% (w/v) PEG3350, 0.1M Bis-Tris pH 5.5

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