6EU5
Leishmania major N-myristoyltransferase with bound myristoyl-CoA and inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-29 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.966 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.770, 90.590, 53.420 |
Unit cell angles | 90.00, 114.14, 90.00 |
Refinement procedure
Resolution | 48.748 - 1.496 |
R-factor | 0.170690026844 |
Rwork | 0.169 |
R-free | 0.20337 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h5z |
RMSD bond length | 0.007 |
RMSD bond angle | 0.906 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.8.0) |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.748 | 1.522 |
High resolution limit [Å] | 1.496 | 1.496 |
Rmerge | 0.036 | 0.526 |
Rmeas | 0.050 | 0.744 |
Rpim | 0.036 | 0.526 |
Number of reflections | 65618 | 3245 |
<I/σ(I)> | 16.8 | 2.1 |
Completeness [%] | 96.3 | 95.1 |
Redundancy | 3.1 | 2.8 |
CC(1/2) | 0.999 | 0.751 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293.15 | PEG 1500 25 % Sodium chloride 0.2 M Sodium cacodylate 0.1 M |