6EP8
InhA Y158F mutant in complex with NADH from Mycobacterium tuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM30A |
Synchrotron site | ESRF |
Beamline | BM30A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.07244 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 98.273, 98.273, 139.836 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.553 - 1.800 |
R-factor | 0.1468 |
Rwork | 0.145 |
R-free | 0.17510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4tro |
RMSD bond length | 0.009 |
RMSD bond angle | 1.129 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.610 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.065 | 1.210 |
Rmeas | 0.067 | 1.240 |
Rpim | 0.015 | 0.271 |
Number of reflections | 37644 | 5382 |
<I/σ(I)> | 35.6 | 2.9 |
Completeness [%] | 100.0 | 100 |
Redundancy | 20.5 | 20.8 |
CC(1/2) | 1.000 | 0.924 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 287 | Thrombin cleaved InhA at 10 mg/ml with 3 to 10 mM of NADH was crystallized in a 24-well crystal plate, Combiclover Junior (Jena Bioscience). The best crystals appeared in drops of 2 ul of enzyme solution, 1 ul of the reservoir solution and 1 ul of distilled water. The reservoir solution contained 100 mM HEPES/NaOH pH 7.5, 50 mM sodium citrate pH 6.5, 7-9 % 2-methyl-2,4-pentanediol. Crystals appeared typically within two to three weeks in this condition. |