6E4Z
Anti-PCSK9 fab 6E2 bound to the modified N-terminal peptide from PCSK9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-30 |
Detector | MARRESEARCH |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 70.929, 99.782, 86.328 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.417 - 2.202 |
R-factor | 0.1965 |
Rwork | 0.195 |
R-free | 0.23590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6e4y |
RMSD bond length | 0.020 |
RMSD bond angle | 1.039 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1-2155_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.420 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.082 | 0.827 |
Rmeas | 0.089 | 0.900 |
Rpim | 0.033 | 0.352 |
Number of reflections | 31726 | 3101 |
<I/σ(I)> | 20.7 | 2.11 |
Completeness [%] | 99.8 | 99.6 |
Redundancy | 7.3 | 6.4 |
CC(1/2) | 0.657 | 0.657 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 15% w/v PEG8000, 0.2 M zinc acetate, 0.1 M sodium cacodylate, pH 6.5 |