6DKP
The complex among DMF5(alpha-D26Y, alpha-Y50A,beta-L98W) TCR, human Class I MHC HLA-A2 and MART-1(26-35)(A27L) peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-29 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97950 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 226.485, 49.063, 92.500 |
Unit cell angles | 90.00, 94.98, 90.00 |
Refinement procedure
Resolution | 47.943 - 2.966 |
R-factor | 0.2315 |
Rwork | 0.229 |
R-free | 0.28640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4l3e |
RMSD bond length | 0.002 |
RMSD bond angle | 0.524 |
Data reduction software | XDS |
Data scaling software | Aimless |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.943 | 3.072 |
High resolution limit [Å] | 2.966 | 2.966 |
Number of reflections | 20514 | 5130 |
<I/σ(I)> | 10.55 | |
Completeness [%] | 94.0 | |
Redundancy | 2.4 | |
CC(1/2) | 0.996 | 0.836 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 12% Peg 3350, 250mM MgCl2, 0.1M HEPES |