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6DFT

Trypanosoma brucei deoxyhypusine synthase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97918
Spacegroup nameP 21 21 21
Unit cell lengths64.358, 242.162, 266.303
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.752 - 3.500
R-factor0.224
Rwork0.222
R-free0.26230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1rqd
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.560
High resolution limit [Å]3.5009.4803.500
Rmerge0.1880.0810.796
Rmeas0.2140.0920.924
Rpim0.1010.0420.455
Total number of observations214291
Number of reflections5284829042556
<I/σ(I)>4.1
Completeness [%]97.297.694.4
Redundancy4.14.43.4
CC(1/2)0.9840.650
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72930.1 M HEPES, 10 mM TCEP, 2 mM NAD+, 8% PEG 6000, 20% ETHYLENE GLYCOL

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