6DBH
Crystal structure of PPAR gamma in complex with NMP422
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-19 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.19 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.942, 62.189, 120.083 |
Unit cell angles | 90.00, 102.57, 90.00 |
Refinement procedure
Resolution | 30.050 - 2.597 |
R-factor | 0.2104 |
Rwork | 0.205 |
R-free | 0.26210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tto |
RMSD bond length | 0.003 |
RMSD bond angle | 0.584 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.050 | 2.640 |
High resolution limit [Å] | 2.597 | 2.597 |
Rmeas | 0.090 | 0.650 |
Number of reflections | 20553 | 1893 |
<I/σ(I)> | 15.7 | |
Completeness [%] | 98.5 | 91.6 |
Redundancy | 5.3 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 1.0M Sodium citrate |