6D06
Human ADAR2d E488Y mutant complexed with dsRNA containing an abasic site opposite the edited base
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-02-11 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97946 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 174.680, 63.440, 132.060 |
| Unit cell angles | 90.00, 126.64, 90.00 |
Refinement procedure
| Resolution | 105.960 - 2.550 |
| R-factor | 0.19334 |
| Rwork | 0.190 |
| R-free | 0.25518 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1zy7 |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.739 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 106.000 | 2.620 |
| High resolution limit [Å] | 2.550 | 2.550 |
| Rmerge | 0.063 | 0.723 |
| Number of reflections | 37329 | 2749 |
| <I/σ(I)> | 15.27 | 2.07 |
| Completeness [%] | 97.4 | 98.1 |
| Redundancy | 3.44 | 3.5 |
| CC(1/2) | 0.998 | 0.736 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 0.1 M MES:NaOH pH 6.5, 14% PEG 20,000 |






