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6D06

Human ADAR2d E488Y mutant complexed with dsRNA containing an abasic site opposite the edited base

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-11
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameC 1 2 1
Unit cell lengths174.680, 63.440, 132.060
Unit cell angles90.00, 126.64, 90.00
Refinement procedure
Resolution105.960 - 2.550
R-factor0.19334
Rwork0.190
R-free0.25518
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1zy7
RMSD bond length0.012
RMSD bond angle1.739
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]106.0002.620
High resolution limit [Å]2.5502.550
Rmerge0.0630.723
Number of reflections373292749
<I/σ(I)>15.272.07
Completeness [%]97.498.1
Redundancy3.443.5
CC(1/2)0.9980.736
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52980.1 M MES:NaOH pH 6.5, 14% PEG 20,000

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