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6D06

Human ADAR2d E488Y mutant complexed with dsRNA containing an abasic site opposite the edited base

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0004000molecular_functionadenosine deaminase activity
A0006396biological_processRNA processing
D0003723molecular_functionRNA binding
D0004000molecular_functionadenosine deaminase activity
D0006396biological_processRNA processing
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue IHP A 801
ChainResidue
AASN391
ATYR658
ALYS662
ATYR668
ALYS672
ATRP687
AGLU689
ALYS690
AHOH901
AHOH905
AHOH906
AILE397
AHOH912
AHOH913
AARG400
AARG401
ALYS519
AARG522
AGLY530
ASER531
ALYS629

site_idAC2
Number of Residues5
Detailsbinding site for residue ZN A 802
ChainResidue
AHIS394
ACYS451
ALYS483
ACYS516
B8AZ13

site_idAC3
Number of Residues18
Detailsbinding site for residue IHP D 801
ChainResidue
DASN391
DILE397
DARG400
DARG401
DTHR513
DLYS519
DARG522
DGLY530
DSER531
DLYS629
DTYR658
DLYS662
DTYR668
DLYS672
DTRP687
DGLU689
DLYS690
DASP695

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN D 802
ChainResidue
DHIS394
DCYS451
DCYS516
DHOH901

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor
ChainResidueDetails
AVAL368
DVAL368

site_idSWS_FT_FI2
Number of Residues20
DetailsBINDING:
ChainResidueDetails
AALA366
ALEU684
DALA366
DSER372
DTHR373
DARG423
DILE528
DSER531
DSER534
DGLY641
DARG674
ASER372
DLEU684
ATHR373
AARG423
AILE528
ASER531
ASER534
AGLY641
AARG674

224931

PDB entries from 2024-09-11

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