6BVB
Crystal structure of HIF-2alpha-pVHL-elongin B-elongin C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.28339 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 59.770, 59.770, 246.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.307 - 2.002 |
R-factor | 0.2005 |
Rwork | 0.199 |
R-free | 0.23550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lm8 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.094 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.12_2829)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.307 | 2.050 |
High resolution limit [Å] | 2.002 | 2.002 |
Rmeas | 0.095 | 0.912 |
Number of reflections | 31053 | 2084 |
<I/σ(I)> | 13.2 | 1.32 |
Completeness [%] | 99.3 | 92.2 |
Redundancy | 8.54 | 3.81 |
CC(1/2) | 0.997 | 0.701 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 26% (v/v) PEG-3350, 0.2 M Li2SO4, 0.1 M Bis-Tris. 7 mg/mL protein complex. |