6BKJ
Crystal Structure of Human Calpain-3 Protease Core in Complex with Leupeptin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-11-19 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.03323 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.930, 106.690, 234.630 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.990 - 3.200 |
R-factor | 0.281 |
Rwork | 0.277 |
R-free | 0.35320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6bdt |
RMSD bond length | 0.011 |
RMSD bond angle | 1.480 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.222 |
High resolution limit [Å] | 3.200 | 3.205 |
Rmeas | 0.650 | 1.750 |
Number of reflections | 23107 | 16879 |
<I/σ(I)> | 4.48 | 1.91 |
Completeness [%] | 98.8 | 99.1 |
Redundancy | 9.55 | 9.56 |
CC(1/2) | 0.980 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295.15 | PEG 8000, MES, Calcium chloride |