6AI6
Crystal structure of SpCas9-NG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 177.377, 68.568, 187.968 |
Unit cell angles | 90.00, 111.51, 90.00 |
Refinement procedure
Resolution | 48.166 - 2.700 |
R-factor | 0.2193 |
Rwork | 0.218 |
R-free | 0.24350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4un3 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.452 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.170 | 2.770 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.099 | 1.202 |
Rpim | 0.063 | 0.778 |
Number of reflections | 58235 | 4509 |
<I/σ(I)> | 9.5 | |
Completeness [%] | 100.0 | |
Redundancy | 3.5 | |
CC(1/2) | 0.992 | 0.553 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | Tris-acetate, pH 8.0, KSCN, PEG 3350 |