6V0O
PRMT5 bound to the PBM peptide from pICln
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-04-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.98 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 100.010, 136.400, 179.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.940 - 2.860 |
R-factor | 0.213 |
Rwork | 0.211 |
R-free | 0.24700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4gqb |
RMSD bond length | 0.010 |
RMSD bond angle | 1.180 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.940 | 2.880 |
High resolution limit [Å] | 2.860 | 2.860 |
Rmeas | 0.130 | 2.020 |
Number of reflections | 28182 | 564 |
<I/σ(I)> | 8.37 | 0.62 |
Completeness [%] | 98.1 | 97.1 |
Redundancy | 3.7 | 3.4 |
CC(1/2) | 0.997 | 0.481 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 281 | 30% PEG 3350 200 mM ammonium sulfate 0.05% w/v dodecyl-maltoside |