6OB2
Crystal structure of wild-type KRAS (GMPPNP-bound) in complex with GAP-related domain (GRD) of neurofibromin (NF1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979180 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.728, 99.736, 155.514 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.996 - 2.845 |
R-factor | 0.2023 |
Rwork | 0.199 |
R-free | 0.24710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nf1 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.996 | 45.996 | 3.020 |
High resolution limit [Å] | 2.845 | 8.410 | 2.845 |
Rmerge | 0.090 | 0.034 | 0.824 |
Rmeas | 0.098 | 0.037 | 0.899 |
Number of reflections | 30699 | 1250 | 4720 |
<I/σ(I)> | 13.88 | 38.24 | 2 |
Completeness [%] | 98.1 | 94 | 95.2 |
Redundancy | 6.42 | 6.076 | 6.199 |
CC(1/2) | 0.999 | 0.999 | 0.664 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Tris pH 8.0 and 19% PAA-co-maleic acid |