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6KO5

Complex structure of Ghrelin receptor with Fab

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL32XU
Synchrotron siteSPring-8
BeamlineBL32XU
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-01
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths253.760, 44.750, 94.400
Unit cell angles90.00, 97.26, 90.00
Refinement procedure
Resolution49.421 - 3.300
R-factor0.2131
Rwork0.210
R-free0.25760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4s0v
RMSD bond length0.002
RMSD bond angle0.505
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.42149.4213.500
High resolution limit [Å]3.3009.2703.300
Rmerge0.8740.1904.384
Rmeas0.8870.1934.445
Total number of observations592198
Number of reflections163747942583
<I/σ(I)>10.2641.71.7
Completeness [%]99.999.299.9
Redundancy36.16735.24436.694
CC(1/2)0.9910.9970.678
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE293100 mM MES (pH6.6-7.0), 400 mM potassium acetate and 36-40% polyethylene glycol (PEG) 300.

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PDB entries from 2024-05-15

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