6KO5
Complex structure of Ghrelin receptor with Fab
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL32XU |
| Synchrotron site | SPring-8 |
| Beamline | BL32XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-06-01 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.0 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 253.760, 44.750, 94.400 |
| Unit cell angles | 90.00, 97.26, 90.00 |
Refinement procedure
| Resolution | 49.421 - 3.300 |
| R-factor | 0.2131 |
| Rwork | 0.210 |
| R-free | 0.25760 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4s0v |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.505 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 49.421 | 49.421 | 3.500 |
| High resolution limit [Å] | 3.300 | 9.270 | 3.300 |
| Rmerge | 0.874 | 0.190 | 4.384 |
| Rmeas | 0.887 | 0.193 | 4.445 |
| Total number of observations | 592198 | ||
| Number of reflections | 16374 | 794 | 2583 |
| <I/σ(I)> | 10.26 | 41.7 | 1.7 |
| Completeness [%] | 99.9 | 99.2 | 99.9 |
| Redundancy | 36.167 | 35.244 | 36.694 |
| CC(1/2) | 0.991 | 0.997 | 0.678 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | LIPIDIC CUBIC PHASE | 293 | 100 mM MES (pH6.6-7.0), 400 mM potassium acetate and 36-40% polyethylene glycol (PEG) 300. |






