6JE9
Crystal structure of Nme1Cas9-sgRNA dimer mediated by double protein inhibitor AcrIIC3 monomers
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-15 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97892 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 112.844, 156.196, 151.600 |
Unit cell angles | 90.00, 108.58, 90.00 |
Refinement procedure
Resolution | 45.597 - 3.460 |
R-factor | 0.2229 |
Rwork | 0.221 |
R-free | 0.26050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jdq |
RMSD bond length | 0.004 |
RMSD bond angle | 0.869 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3247: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.520 |
High resolution limit [Å] | 3.460 | 3.460 |
Rmerge | 0.077 | 0.952 |
Rmeas | 0.088 | 1.113 |
Rpim | 0.042 | 0.567 |
Number of reflections | 65468 | 3286 |
<I/σ(I)> | 15.5 | 1 |
Completeness [%] | 99.5 | 99.4 |
Redundancy | 4.3 | 3.7 |
CC(1/2) | 0.993 | 0.138 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.5 | 289 | 0.21M NaAc, 0.1 M NaAc pH 5.5, 0.04M tris HCl pH 7.5, 32% pentaerythritol propoxylate (5/4 PO/OH) |