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6EP8

InhA Y158F mutant in complex with NADH from Mycobacterium tuberculosis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM30A
Synchrotron siteESRF
BeamlineBM30A
Temperature [K]100
Detector technologyCCD
Collection date2016-02-14
DetectorADSC QUANTUM 315r
Wavelength(s)1.07244
Spacegroup nameP 62 2 2
Unit cell lengths98.273, 98.273, 139.836
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.553 - 1.800
R-factor0.1468
Rwork0.145
R-free0.17510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tro
RMSD bond length0.009
RMSD bond angle1.129
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.22)
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.6101.900
High resolution limit [Å]1.8001.800
Rmerge0.0651.210
Rmeas0.0671.240
Rpim0.0150.271
Number of reflections376445382
<I/σ(I)>35.62.9
Completeness [%]100.0100
Redundancy20.520.8
CC(1/2)1.0000.924
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5287Thrombin cleaved InhA at 10 mg/ml with 3 to 10 mM of NADH was crystallized in a 24-well crystal plate, Combiclover Junior (Jena Bioscience). The best crystals appeared in drops of 2 ul of enzyme solution, 1 ul of the reservoir solution and 1 ul of distilled water. The reservoir solution contained 100 mM HEPES/NaOH pH 7.5, 50 mM sodium citrate pH 6.5, 7-9 % 2-methyl-2,4-pentanediol. Crystals appeared typically within two to three weeks in this condition.

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PDB entries from 2024-09-18

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