Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YA5

CRYSTAL STRUCTURE OF c-MET IN COMPLEX WITH NOVEL INHIBITOR

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2013-05-15
DetectorADSC QUANTUM 315r
Wavelength(s)0.9791
Spacegroup nameP 21 21 21
Unit cell lengths42.360, 47.340, 158.690
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.927 - 1.890
R-factor0.2121
Rwork0.211
R-free0.23490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4gg5
RMSD bond length0.007
RMSD bond angle1.095
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8_1069))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.92740.9271.940
High resolution limit [Å]1.8908.4501.890
Rmerge0.0460.0260.388
Rmeas0.0530.0310.453
Total number of observations187189
Number of reflections492334683657
<I/σ(I)>17.3335.513.49
Completeness [%]99.784.9100
Redundancy3.8023.3143.815
CC(1/2)0.9980.9980.862
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52930.1M Tris pH7.5, 15% glycerol, 12% MPD, 5% isopropanol, 15% PEG5Kmme

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon