5VQF
Crystal Structure of pro-TGF-beta 1
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-12 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97934, 0.97932, 0.97956, 0.95667 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.660, 126.920, 137.920 |
Unit cell angles | 90.00, 96.70, 90.00 |
Refinement procedure
Resolution | 37.142 - 2.900 |
R-factor | 0.2406 |
Rwork | 0.239 |
R-free | 0.27980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rjr |
RMSD bond length | 0.005 |
RMSD bond angle | 0.849 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SOLVE |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.980 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.052 | 2.740 |
Number of reflections | 39918 | 2994 |
<I/σ(I)> | 15.3 | 0.55 |
Completeness [%] | 96.1 | 98 |
Redundancy | 4.3 | 4.3 |
CC(1/2) | 0.999 | 0.330 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 7% PEG 3350, 17% isopropanol, 0.1m Na citrate pH 5.6 |