5VJQ
Complex between HyHEL10 Fab fragment heavy chain mutant (I29F, S52T, Y53F) and Pekin duck egg lysozyme isoform I (DEL-I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 88.650, 132.660, 199.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.320 - 1.900 |
R-factor | 0.1946 |
Rwork | 0.193 |
R-free | 0.23510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v8g 3d9a |
RMSD bond length | 0.012 |
RMSD bond angle | 1.541 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.29) |
Phasing software | PHASER (2.7.17) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.780 | 49.780 | 1.930 |
High resolution limit [Å] | 1.900 | 10.410 | 1.900 |
Rmerge | 0.098 | 0.045 | 0.783 |
Rmeas | 0.105 | 0.048 | 0.838 |
Rpim | 0.035 | 0.017 | 0.286 |
Number of reflections | 180881 | ||
<I/σ(I)> | 12.6 | ||
Completeness [%] | 98.0 | 96.5 | 94.6 |
Redundancy | 8.2 | 8.6 | 8.1 |
CC(1/2) | 0.998 | 0.998 | 0.642 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 4.75 | 293 | 100 mM sodium citrate (pH 4.75), 17 % (w/v) PEG3350 |