5UGF
Crystal structure of human purine nucleoside phosphorylase (F159Y) mutant complexed with DADMe-ImmG and phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-18 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97931 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.960, 124.270, 136.730 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 69.260 - 2.200 |
R-factor | 0.21503 |
Rwork | 0.214 |
R-free | 0.23809 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3phb |
RMSD bond length | 0.009 |
RMSD bond angle | 1.368 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.260 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.170 | |
Number of reflections | 91303 | |
<I/σ(I)> | 5.8 | 1.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.6 | 6 |
CC(1/2) | 0.990 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 100 mM HEPES, pH 7.5, 0.2 M lithium sulfate, 25% w/v PEG3350 |