5T8D
Engineered variant of I-OnuI meganuclease targeting the HIV integrase gene; harbors 47 point mutations relative to wild-type I-OnuI
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 108 |
Detector technology | PIXEL |
Collection date | 2016-03-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.701, 75.007, 165.158 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.381 - 2.150 |
R-factor | 0.1847 |
Rwork | 0.182 |
R-free | 0.22810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qqy |
RMSD bond length | 0.007 |
RMSD bond angle | 0.996 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.230 |
High resolution limit [Å] | 2.150 | 4.630 | 2.150 |
Rmerge | 0.093 | 0.047 | 0.618 |
Rmeas | 0.097 | 0.049 | 0.649 |
Rpim | 0.027 | 0.014 | 0.193 |
Total number of observations | 351202 | ||
Number of reflections | 27792 | ||
<I/σ(I)> | 6.7 | ||
Completeness [%] | 99.9 | 100 | 99.2 |
Redundancy | 12.6 | 12 | 11 |
CC(1/2) | 0.999 | 0.904 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.2 M Ammonium sulfate, 0.1 M HEPES pH 7.0, 22.5% w/v Polyethylene glycol 3,350 |