5O6H
Human NMT1 in complex with myristoyl-CoA and inhibitor IMP-917
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-05-13 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 79.138, 178.852, 58.465 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.000 - 1.290 |
R-factor | 0.16533 |
Rwork | 0.164 |
R-free | 0.19348 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4c2y |
RMSD bond length | 0.028 |
RMSD bond angle | 2.498 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 89.000 | 1.310 |
High resolution limit [Å] | 1.290 | 1.290 |
Rmerge | 0.062 | 0.651 |
Rpim | 0.039 | 0.595 |
Number of reflections | 206823 | 9516 |
<I/σ(I)> | 14.7 | 1.6 |
Completeness [%] | 99.1 | 93.1 |
Redundancy | 6.2 | 3.4 |
CC(1/2) | 0.999 | 0.697 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 291 | 0.4M Sodium phosphate buffer, 17.5% PEG 3350 |