5NI6
Crystal structure of human LTA4H mutant D375N in complex with LTA4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91841 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.130, 87.450, 99.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.229 - 1.540 |
R-factor | 0.1597 |
Rwork | 0.158 |
R-free | 0.19080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ni2 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.947 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.229 | 1.600 |
High resolution limit [Å] | 1.540 | 1.540 |
Rmerge | 0.104 | 1.729 |
Rpim | 0.045 | 0.753 |
Number of reflections | 100716 | 9575 |
<I/σ(I)> | 10.35 | 1.06 |
Completeness [%] | 99.5 | 95.77 |
Redundancy | 6.5 | 6.3 |
CC(1/2) | 0.998 | 0.432 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIQUID DIFFUSION | 7 | 277 | 22% (w/v) PEG 8000, 100 mM imidazole pH 7.0, 100 mM sodium acetate, 5 mM YbCl3 |