Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5L5U

Yeast 20S proteasome with human beta5i (1-138; V31M) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 17

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2015-12-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths134.480, 299.630, 144.700
Unit cell angles90.00, 112.61, 90.00
Refinement procedure
Resolution15.000 - 2.600
R-factor0.18981
Rwork0.189
R-free0.21067
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cz4
RMSD bond length0.004
RMSD bond angle0.922
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareREFMAC
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.700
High resolution limit [Å]2.6002.600
Rmerge0.0700.520
Number of reflections319091
<I/σ(I)>12.62.8
Completeness [%]98.798.7
Redundancy3.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.829320 mM MgAC2, 13% MPD, 0.1 M MES

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon