5I04
Crystal structure of the orphan region of human endoglin/CD105
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-09-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 65 |
Unit cell lengths | 114.150, 114.150, 120.620 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.737 - 2.420 |
R-factor | 0.2223 |
Rwork | 0.220 |
R-free | 0.26270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3sex 3set 4wrn |
RMSD bond length | 0.003 |
RMSD bond angle | 0.554 |
Data reduction software | XDS ((VERSION November 3, 2014)) |
Data scaling software | XSCALE ((VERSION November 3, 2014 BUILT=20141103)) |
Phasing software | PHASER ((2.5.6)) |
Refinement software | PHENIX ((1.10.1_2155: 000)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.740 | 2.490 |
High resolution limit [Å] | 2.420 | 2.420 |
Rmerge | 0.811 | |
Number of reflections | 33737 | |
<I/σ(I)> | 11.76 | 1.25 |
Completeness [%] | 99.1 | 98.5 |
Redundancy | 3.4 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 30% PEG 1000, 0.1 M TRIS-HCL |