5HKX
Crystal Structure of c-Cbl TKBD-RING domains (Y371E mutant) Refined to 1.85 A Resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.075, 108.737, 49.304 |
Unit cell angles | 90.00, 115.31, 90.00 |
Refinement procedure
Resolution | 34.468 - 1.850 |
R-factor | 0.169 |
Rwork | 0.167 |
R-free | 0.21360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bum |
RMSD bond length | 0.011 |
RMSD bond angle | 1.013 |
Data reduction software | XDS |
Data scaling software | Aimless (0.2.17) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.240 | 41.240 | 1.890 |
High resolution limit [Å] | 1.850 | 9.060 | 1.850 |
Rmerge | 0.064 | 0.027 | 0.613 |
Total number of observations | 120005 | 1092 | 6963 |
Number of reflections | 35622 | ||
<I/σ(I)> | 12.9 | 43.5 | 1.9 |
Completeness [%] | 99.5 | 96.5 | 99.5 |
Redundancy | 3.4 | 3.5 | 3.2 |
CC(1/2) | 0.998 | 0.998 | 0.706 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 10% (w/v) PEG 5000 MME, 0.1M MES, 12% (v/v) 1-propanol |