5HKF
Crystal structure of Mycobacterium tuberculosis H37Rv orotate phosphoribosyltransferase in complex with 5-phospho-alpha-D-ribosyl 1-diphosphate (PRPP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-06 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.899 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.201, 58.629, 57.224 |
Unit cell angles | 90.00, 116.86, 90.00 |
Refinement procedure
Resolution | 51.050 - 2.250 |
R-factor | 0.18942 |
Rwork | 0.187 |
R-free | 0.23340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5hki |
RMSD bond length | 0.013 |
RMSD bond angle | 1.691 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.050 | 2.330 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.045 | 0.131 |
Number of reflections | 15782 | |
<I/σ(I)> | 19.66 | 7.08 |
Completeness [%] | 99.3 | 99.5 |
Redundancy | 4.7 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 0.1M HEPES pH 7.5, 10% (w/v) PEG6000, 5% (v/v) MPD, 1mM PRPP |