5EW3
Human Vascular Endothelial Growth Factor Receptor 2 (KDR) Kinase Domain in complex with AAL993
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2002-10-03 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 0.87270 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.500, 55.760, 89.760 |
Unit cell angles | 90.00, 92.28, 90.00 |
Refinement procedure
Resolution | 19.680 - 2.500 |
R-factor | 0.2194 |
Rwork | 0.218 |
R-free | 0.25350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vr2 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.990 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | BUSTER-TNT |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.081 | 0.582 |
Number of reflections | 23229 | |
<I/σ(I)> | 17.05 | |
Completeness [%] | 98.9 | 98.9 |
Redundancy | 3.37 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 290 | 0.1M MES pH6.5, 8% w/v PEG 8000, 0.02M LITHIUM ACETATE |