5E8J
Crystal structure of mRNA cap guanine-N7 methyltransferase in complex with RAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 |
Unit cell lengths | 49.147, 50.487, 84.579 |
Unit cell angles | 90.06, 92.41, 115.41 |
Refinement procedure
Resolution | 28.162 - 2.350 |
R-factor | 0.2129 |
Rwork | 0.210 |
R-free | 0.26850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bgv |
RMSD bond length | 0.003 |
RMSD bond angle | 0.790 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 84.485 | 28.162 | 2.480 |
High resolution limit [Å] | 2.350 | 7.430 | 2.350 |
Rmerge | 0.032 | 0.349 | |
Rmeas | 0.111 | ||
Rpim | 0.079 | 0.032 | 0.349 |
Total number of observations | 45164 | 1487 | 5607 |
Number of reflections | 28355 | ||
<I/σ(I)> | 6.6 | 15.1 | 2 |
Completeness [%] | 92.8 | 89.9 | 87.1 |
Redundancy | 1.6 | 1.7 | 1.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1M MES pH 6.5, 30% PEG 4000 |