Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5E7D

Crystal Structure of the fifth bromodomain of human PB1 in complex with a hydroxyphenyl ligand

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2011-03-29
DetectorRIGAKU RAXIS IV
Wavelength(s)1.52
Spacegroup nameP 1 21 1
Unit cell lengths40.790, 135.664, 56.045
Unit cell angles90.00, 90.60, 90.00
Refinement procedure
Resolution23.800 - 1.870
R-factor0.2026
Rwork0.201
R-free0.24830
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle1.364
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHASER (2.1.4)
Refinement softwareREFMAC (5.5.0110)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]23.81923.8191.970
High resolution limit [Å]1.8665.9101.870
Rmerge0.0690.0400.632
Rmeas0.079
Rpim0.0370.0240.369
Total number of observations196359470321051
Number of reflections44203
<I/σ(I)>12.125.82
Completeness [%]87.785.376.7
Redundancy4.43.43.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52770.2M Na2SO4 20w/v PEG_3350 10v/v ethylene_glycol

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon