5BY6
Crystal structure of Trichinella spiralis thymidylate synthase complexed with dUMP
Replaces: 4G9UExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-03-19 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.91841 |
Spacegroup name | P 1 |
Unit cell lengths | 51.695, 65.914, 96.511 |
Unit cell angles | 85.31, 85.33, 67.12 |
Refinement procedure
Resolution | 19.960 - 1.900 |
R-factor | 0.1674 |
Rwork | 0.165 |
R-free | 0.22010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ez8 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.815 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.130 | 1.900 |
Rmerge | 0.128 | 0.071 | 0.644 |
Total number of observations | 446073 | ||
Number of reflections | 89350 | ||
<I/σ(I)> | 6.1 | ||
Completeness [%] | 98.0 | 99.5 | 96.5 |
Redundancy | 5 | 4.9 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | Tris-HCl, PEG 4K, Magnesium Chloride |